Hello,
We'll have Geuvadis analysis group TC on Thursday 12th of September
at 2pm CET.
On the agenda:
- Analysis updates (see below)
- Data visualization and Ensembl collaboration
- Pedro will present on differential expression analysis
- AOB
Call details - different from the usual!
Germany +49 692 573 804 41
Netherlands +31 108 920 271
Spain +34 931 816 661
Sweden +46 840 309 949
Switzerland +41 58 262 07 22
United Kingdom +44 203 370 57 19
United States +1 646 381 08 89
Access code: 611683
For your information, I have my knee surgery scheduled for this
Friday. I'll probably be offline only for a couple of days, but I'm
not sure if I'll be able to work that much next week. Thus, if you
need some feedback or data from me, let me know now so we can try to
sort it out before the surgery.
We need to start wrapping up the analysis soon to put the paper
together. Thus I'd like to ask you to give brief summary on the
stage of your analysis - what you've been doing, are what kind of
things are still pending, and when you would be ready to present the
result and hand results and text over to me. Below is a list of
analyses/people from the paper outline - if your name is there but
you won't be on the call, please send the info to the analysis group
mailing list before the call.
- QC
- Jonas, Olof, Peter, Tuuli
- Differential expression
- Pedro
- mRNA qualitative/quantitative variation
- Jean, Mar
- ASE
- Tuuli
- Splicing variation
- Micha
- Soft splicing
- Matthias
- miRNA-mRNA interactions
- Marc, Henk?
- RNA editing
- Thomas W
- Conjoined genes
- Liliana
- n-TARs
- Daniela
- Transcription of repeats
- Peter/Irina
- QTLs
- Tuuli
- Loss-of-function
- Manny
- Data visualization
- Natalja
best regards,
Tuuli
--
Tuuli Lappalainen, PhD
Department of Genetic Medicine and Development
University of Geneva Medical School
CMU / Rue Michel-Servet 1
1211 Geneva 4
Switzerland
Tel. +41-(0)22-3795550
tuuli.lappalainen@unige.ch