Hello,

Here are the minutes. The next call will be either next week, August 30th, or in two weeks on September 6th - I'll let you know next week.

- People should update methods and analyses in the new wiki, and send also an email to the analysis group list if there's significant new content
- The date and location of the analysis group meeting is undecided - please will in the form: https://docs.google.com/spreadsheet/viewform?formkey=dGhhRkVCSllrNEdTYVlSZ3B4b0F2NWc6MQ .
- Marc has uploaded miRNA QC and quantification results
- Tuuli is finishing ASE analysis and putting together the final methods and pipeline for eQTL analysis
- Pedro emailed Tuuli that the exon inclusion statistics and differential expression analysis is pretty much done
- Matthias and Philip from Kiel presented results of splicing and soft splicing analysis. Matthias will try to join the next loss-of-function call to discuss the best ways to quantify splicing and test the statistical association to genotypes; they will look into population variation of soft splicing also without the aspect of genetic variants.

best regards,
Tuuli


Tuuli Lappalainen, PhD
Department of Genetic Medicine and Development
University of Geneva Medical School
CMU / Rue Michel-Servet 1
1211 Geneva 4
Switzerland
Tel. +41-(0)22-3795550
tuuli.lappalainen@unige.ch
On 8/22/12 3:16 PM, Tuuli Lappalainen wrote:
Hello,

We'll have a Geuvadis RNAseq analysis group TC on Thursday August 23rd at 2pm.

On the agenda:
- the next analysis group meeting
- presentation by Matthias about soft splicing (probably, if the phone system of their new building allows him to call in)
- other analysis updates
- AOB

Call details are:
from outside spain; 0034917911859
from spain; 900800678
Access code; 3160100

best regards,
Tuuli

-- 
Tuuli Lappalainen, PhD
Department of Genetic Medicine and Development
University of Geneva Medical School
CMU / Rue Michel-Servet 1
1211 Geneva 4
Switzerland
Tel. +41-(0)22-3795550
tuuli.lappalainen@unige.ch


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