Hi all,
As part of the inter-lab comparison of the results I was thinking on also comparing the QC performed on the RNA delivered from Geneva.
I suppose that most of the sequencing centres do some kind QC before proceeding with fragmentation and library prep (e.g. we do qPCR and Bioanalyzer).
If you have e.g. the concentrations and RIN-values that you determined for the five common samples (HG00117, HG00355, NA06986, NA19095, NA20527), could you please up-load this as well to the ftp-site?
Remember to specify what method/instrument you used to get the values so that we can do a "fair" comparison.

I suggest you put it in the /upload/geuvadis/wp4_rnaseq/main_project/sample/input_qc folder I just made for this purpose.

Thanks and have a nice weekend,
Mathias

-- 
_____________________________________________
Mathias Brännvall, PhD
Project coordinator
Dept. of Medical Sciences, sect. Molecular Medicine, 
Uppsala University
phone:  +46-(0)18-6114934
mobile: +46-(0)70-1679446

e-mail: Mathias.Brannvall@medsci.uu.se