Hello,

Here is the final list of Geuvadis RNAseq samples to exclude from all mRNA analyses:

NA18861.4.M_120208_5 (quantification, QC and ASE outlier)
NA19225.6.M_120119_5 (ASE outlier probably due to contamination)
HG00237.4.M_120208_1 (ASE outlier probably due to contamination)
NA12399.7.M_120219_1 (ASE outlier probably due to contamination)
NA07000.1.M_120209_2 (ASE outlier probably due to contamination)

There are a couple of other samples to keep an eye on; within a couple of days I will finish the analysis of these and provide an updated sample information file with clear tags of samples to include in analysis and warning flags.

best regards,
Tuuli

-- 
Tuuli Lappalainen, PhD
Department of Genetic Medicine and Development
University of Geneva Medical School
CMU / Rue Michel-Servet 1
1211 Geneva 4
Switzerland
Tel. +41-(0)22-3795550
tuuli.lappalainen@unige.ch