Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen@unige.ch
Subject: | Geuvadis analysis group meeting in Geneva |
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Date: | Thu, 05 Apr 2012 11:28:49 +0200 |
From: | Tuuli Lappalainen <Tuuli.Lappalainen@unige.ch> |
To: | Tuuli.Lappalainen@unige.ch, gabrielle.bertier@crg.es, olof.karlberg@medsci.uu.se, jean.monlong@crg.eu, p.a.c.hoen@lumc.nl, i.pulyakhina@lumc.nl, jonas.carlsson@medsci.uu.se, esther.lizano@crg.eu, natalja@ebi.ac.uk, pedro.ferreira@crg.es, marc.friedlaender@crg.eu, r.haesler@mucosa.de, m.barann@ikmb.uni-kiel.de, timstrom@helmholtz-muenchen.de, thomas.wieland@helmholtz-muenchen.de, thomas.schwarzmayr@helmholtz-muenchen.de, sultan@molgen.mpg.de, micha@sammeth.net, rivas@broadinstitute.org |
CC: | Ancilla Stefani <Ancilla.Stefani@unige.ch> |
Monday, April 16 | |
11 -12 am | Geuvadis RNAseq project: Background, aims and data |
12 am -12:30 pm | Lunch |
12:30 – 2:30pm | Presentation by the labs: Ideas, interests, analysis plans and approaches. 10-25 min each + discussion |
Geneva | |
CNAG | |
Oxford | |
EBI | |
2:30 -3 pm | Coffee |
3 -5 pm | Presentation by the labs: |
Kiel | |
Munich | |
CRG | |
Leiden | |
Uppsala | |
Berlin | |
5 - 5:30 pm | Wrap-up |
8 pm | Dinner at Restaurant Demi-Lune |
Tuesday, April 17 | |
9 -11:30 am | Building an analysis plan |
11:30 -12:30 am | Lunch |
12:30 – 2:30 pm | Building an analysis plan |
2:30 – 3 pm | Coffee |
3 – 3:30 pm | Wrap-up |
- What
are the essential analyses that must be done? What else will we
do? What are the high-priority analyses?
- How
do we integrate the different data types?
- What
kind of data types/formats are needed for the analyses? Sharing
of tools and data?
- Who
will take the lead of each analysis module? Who else wants to be
involved/informed?
- What
are the analyses to do for the Biology of Genomes poster?
- Timelines
and deadlines
- Future
meetings
- Communication:
TCs,
mailing lists, wiki, skype
-- Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen@unige.ch