geuvadis_rnaseq

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[Geuvadis_rnaseq] FYI: Registration - GEUVADIS AM 2012: 29-31/10/2012 - Santiago de Compostela

by Gabrielle Anne Bertier

FYI - Here is the information for the GEUVADIS Annual Meeting during which the results of all project WP will be presented. Kind regards, Gabrielle From: Gabrielle Anne Bertier Subject: Registration - GEUVADIS AM 2012: 29-31/10/2012 - Santiago de Compostela Dear all, Please find here the registration form<https://docs.google.com/spreadsheet/viewform?formkey=dEpnY0h6Y2Z3Y291dFhvRz…> for our next Annual Meeting; to be filled in before August 31st 2012. Here is a draft programme for the meeting: GEUVADIS Annual Meeting 2 - Santiago de Compostela - 29-31 October 2012 Sunday 28 October - 20:00 - Welcome dinner Monday 29 October - 09:00 - 18:00 - GEUVADIS Annual Meeting, WP updates and feedback from SAB. Tuesday 30 October - 09:00 - Wednesday 31 October -13:00 Workshop: Exome sequencing data storage, sharing and analysis: from National to European standards. If you want to be involved in the organization of this workshop, or suggest speakers please let me know. Let me know if anything remains unclear, Kind regards, Gabrielle PS: registration form full link: https://docs.google.com/spreadsheet/viewform?formkey=dEpnY0h6Y2Z3Y291dFhvRz…<https://docs.google.com/spreadsheet/viewform?formkey=dEpnY0h6Y2Z3Y291dFhvRz…> Gabrielle Bertier Scientific Project Manager International Collaboration Office CRG, Center for Genomic Regulation Carrer Dr. Aiguader, 88 08003 Barcelona, España Tel: +34933160374 Mobile: +34639960656 email: gabrielle.bertier(a)crg.es<mailto:gabrielle.bertier@crg.es> web: www.geuvadis.eu

12 years, 2 months

[Geuvadis_rnaseq] DEADLINE TODAY - GEUVADIS RNA Analysis Meeting 2: BARCELONA

by Gabrielle Anne Bertier

Gentle reminder Please register today ! Gabrielle Registration form full link: https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu… From: Gabrielle Anne Bertier Sent: 05 June, 2012 10:04 AM To: 'geuvadis_rna_analysis(a)lists.crg.es'; 'geuvadis_rnaseq(a)lists.crg.es' Cc: 'geuvadis_wpl(a)lists.crg.es'; Xavier Estivill; Michela Bertero; 'Tuuli Lappalainen'; Magali Bartomeus Cistare Subject: REMINDER: GEUVADIS RNA Analysis Meeting 2: BARCELONA Dear all, please remember to register for the meeting before this Friday ! Gabrielle Registration form full link: https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu… From: Gabrielle Anne Bertier Sent: 30 May, 2012 1:20 PM To: geuvadis_rna_analysis(a)lists.crg.es<mailto:geuvadis_rna_analysis@lists.crg.es>; geuvadis_rnaseq(a)lists.crg.es<mailto:geuvadis_rnaseq@lists.crg.es> Cc: geuvadis_wpl(a)lists.crg.es<mailto:geuvadis_wpl@lists.crg.es>; Xavier Estivill; Michela Bertero; 'Tuuli Lappalainen'; Magali Bartomeus Cistare Subject: GEUVADIS RNA Analysis Meeting 2: BARCELONA Dear all, Please find here the registration form<https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu…> for the 2nd GEUVADIS RNA analysis meeting; which will take place at the CRG in Barcelona; on:. Monday July 9th; from 12:00 to 17:00 Tuesday July 10th; from 09:00 to 16:00. A detail agenda will follow soon. Please forward this to any relevant person in your lab. Registration deadline: 8th June 2012 The hotel has to be paid from your own GEUVADIS budget. We have pre-booked 30 hotel rooms for the 9th of July near the CRG; in: Hotel H10 Marina<http://www.hotelh10marinabarcelona.com/en/index.html> Hotel H4<http://www.besthotelscities.com/hotel4barcelona/index.php> If you want to stay for more nights, or in a different hotel please tick the according box in the registration form, and we'll provide you with hotel suggestions. Registration form full link: https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu… Don't hesitate to contact me in case you have any question, Kind regards, Gabrielle Gabrielle Bertier Scientific Project Manager International and Scientific Affairs CRG, Center for Genomic Regulation Carrer Dr. Aiguader, 88 08003 Barcelona, España Tel: +34933160374 Mobile: +34639960656 email: gabrielle.bertier(a)crg.es<mailto:gabrielle.bertier@crg.es> web: www.geuvadis.eu; www.fliact.eu

12 years, 3 months

[Geuvadis_rnaseq] REMINDER: GEUVADIS RNA Analysis Meeting 2: BARCELONA

by Gabrielle Anne Bertier

Dear all, please remember to register for the meeting before this Friday ! Gabrielle Registration form full link: https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu… From: Gabrielle Anne Bertier Sent: 30 May, 2012 1:20 PM To: geuvadis_rna_analysis(a)lists.crg.es; geuvadis_rnaseq(a)lists.crg.es Cc: geuvadis_wpl(a)lists.crg.es; Xavier Estivill; Michela Bertero; 'Tuuli Lappalainen'; Magali Bartomeus Cistare Subject: GEUVADIS RNA Analysis Meeting 2: BARCELONA Dear all, Please find here the registration form<https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu…> for the 2nd GEUVADIS RNA analysis meeting; which will take place at the CRG in Barcelona; on:. Monday July 9th; from 12:00 to 17:00 Tuesday July 10th; from 09:00 to 16:00. A detail agenda will follow soon. Please forward this to any relevant person in your lab. Registration deadline: 8th June 2012 The hotel has to be paid from your own GEUVADIS budget. We have pre-booked 30 hotel rooms for the 9th of July near the CRG; in: Hotel H10 Marina<http://www.hotelh10marinabarcelona.com/en/index.html> Hotel H4<http://www.besthotelscities.com/hotel4barcelona/index.php> If you want to stay for more nights, or in a different hotel please tick the according box in the registration form, and we'll provide you with hotel suggestions. Registration form full link: https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu… Don't hesitate to contact me in case you have any question, Kind regards, Gabrielle Gabrielle Bertier Scientific Project Manager International and Scientific Affairs CRG, Center for Genomic Regulation Carrer Dr. Aiguader, 88 08003 Barcelona, España Tel: +34933160374 Mobile: +34639960656 email: gabrielle.bertier(a)crg.es<mailto:gabrielle.bertier@crg.es> web: www.geuvadis.eu; www.fliact.eu

12 years, 3 months

[Geuvadis_rnaseq] Re : Geuvadis LoF abstract for ASHG

by Tuuli Emilia LAPPALAINEN

Hello all, After some thought we've decided to add a couple of names to the author list of the LoF abstract. Our initial author list included people who are contributing specifically to LoF analysis, Natalja and Thasso for processing of the entire dataset, and the PIs and the Geuvadis Consortium representing the data. But it's fair to include one analysis person from all the labs on behalf of the data production, so we added Marc, Matthias, Olof, and Monkol from Daniel's lab. Thus, the latest version of the author list is the following: Manuel A Rivas, Tuuli Lappalainen, Michael Sammeth, Daniel MacArthur, Natalja Kurbatova, Thomas Wieland, Monkol Lek, Thasso Griebel, Matthias Barann, Marc Sultan, Olof Karlberg, Peter AC ‘t Hoen, Tim Strom, Stefan Schreiber, Hans Lehrach, Stylianos Antonarakis, Gert-Jan van Ommen, Ralf Sudbrak, Robert Häsler, Alvis Brazma, Ann-Christine Syvanen, Philip Rosenstiel, Thomas Meitinger, Roderic Guigo, Ivo Gut, Xavier Estivill, Mark McCarthy, Emmanouil T Dermitzakis, The Geuvadis Consortium best regards, Tuuli Le 01-06-12, Manuel Rivas <rivas(a)broadinstitute.org> a écrit : > Hello, > > Attached is an abstract that I am planning to submit on behalf of the project on loss of variants and their effect on the transcriptome. Please do send any comments you may have by Monday, June 4th. > > > > > Best Regards, > Manuel Rivas > > >

12 years, 3 months

[Geuvadis_rnaseq] Geuvadis LoF abstract for ASHG

by Manuel Rivas

Hello, Attached is an abstract that I am planning to submit on behalf of the project on loss of variants and their effect on the transcriptome. Please do send any comments you may have by Monday, June 4th. Best Regards, Manuel Rivas

12 years, 3 months

[Geuvadis_rnaseq] Geuvadis RNAseq abstract for ASHG

by Tuuli Lappalainen

Dear all, Enclosed please find a draft for the abstract that I'm planning to submit on behalf of the Geuvadis RNAseq project for the ASHG meeting in San Francisco. Comments are welcome; please send them by June 4th. The abstract has the maximum allowed number of authors (30) - at least one analyst per group and the PIs. I know there are many others who would deserve to be on that list, and apologies for not being able to include you here. In addition to this main abstract, there will be at least one sub-project abstract that will be sent around later. best regards, Tuuli -- Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen(a)unige.ch

12 years, 3 months

[Geuvadis_rnaseq] GEUVADIS RNA Analysis Meeting 2: BARCELONA

by Gabrielle Anne Bertier

Dear all, Please find here the registration form<https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu…> for the 2nd GEUVADIS RNA analysis meeting; which will take place at the CRG in Barcelona; on:. Monday July 9th; from 12:00 to 17:00 Tuesday July 10th; from 09:00 to 16:00. A detail agenda will follow soon. Please forward this to any relevant person in your lab. Registration deadline: 8th June 2012 The hotel has to be paid from your own GEUVADIS budget. We have pre-booked 30 hotel rooms for the 9th of July near the CRG; in: Hotel H10 Marina<http://www.hotelh10marinabarcelona.com/en/index.html> Hotel H4<http://www.besthotelscities.com/hotel4barcelona/index.php> If you want to stay for more nights, or in a different hotel please tick the according box in the registration form, and we'll provide you with hotel suggestions. Registration form full link: https://docs.google.com/spreadsheet/viewform?pli=1&formkey=dDFxZ2diT0hUVFhu… Don't hesitate to contact me in case you have any question, Kind regards, Gabrielle Gabrielle Bertier Scientific Project Manager International and Scientific Affairs CRG, Center for Genomic Regulation Carrer Dr. Aiguader, 88 08003 Barcelona, España Tel: +34933160374 Mobile: +34639960656 email: gabrielle.bertier(a)crg.es<mailto:gabrielle.bertier@crg.es> web: www.geuvadis.eu; www.fliact.eu

12 years, 3 months

[Geuvadis_rnaseq] poster prize for Geuvadis RNAseq project

by Tuuli Lappalainen

Dear all, I already told the Geuvadis RNAseq analysis group that our poster at the Biology of Genomes meeting was very popular - in addition to that, on the last day of the meeting it was announced to be one of the poster prize winners! Thanks again for all of you for your contribution thus far. I'm now even more motivated than before to continue the work to meet the high expectations for our project. best regards, Tuuli -- Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen(a)unige.ch

12 years, 4 months

[Geuvadis_rnaseq] Geuvadis RNAseq analysis group meeting July 9-10

by Tuuli Lappalainen

Dear all, We will have the next Geuvadis analysis group meeting in Barcelona in July 9-10. More info will follow around the end of May. best regards, Tuuli -- Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen(a)unige.ch

12 years, 4 months

[Geuvadis_rnaseq] GEUVADIS RNAseq General Update

by Gabrielle Anne Bertier

Dear all, At the request of Tuuli, please fill in the doodle<http://doodle.com/3i5f4wt28ez596sx> to schedule a TC with the whole RNAseq group for an update on the data analysis. Tentative agenda: - status of the data - updates from the analysis group meeting - analysis plans - Biology of Genomes poster draft - future meetings Kind regards, Gabrielle doodle full link: http://doodle.com/3i5f4wt28ez596sx Gabrielle Bertier Scientific Project Manager International Collaboration Office CRG, Center for Genomic Regulation Carrer Dr. Aiguader, 88 08003 Barcelona, España Tel: +34933160374 Mobile: +34639960656 email: gabrielle.bertier(a)crg.es<mailto:gabrielle.bertier@crg.es> web: www.geuvadis.eu

12 years, 4 months

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