[Geuvadis_rnaseq] RNA-seq strandedness benchmark

Dear all, Please find below a message from Philip about RNA study results. We will setup a doodle for a TC to discuss these results. Please be so kind as to pass this on to any relevant person, and let me know if there's anyone I should add to the Geuvadis RNAseq mailing list. Kind regards, Gabrielle Gabrielle Bertier Scientific Project Manager International Collaboration and Sponsorship Office CRG, Center for Genomic Regulation Carrer Dr. Aiguader, 88 08003 Barcelona, España Tel: +34933160374 Mobile: +34639960656 email: gabrielle.bertier@crg.es<mailto:gabrielle.bertier@crg.es> web: www.geuvadis.eu From: Rosenstiel, Philip [mailto:p.rosenstiel@mucosa.de]<mailto:[mailto:p.rosenstiel@mucosa.de]> Sent: jueves, 01 de septiembre de 2011 17:08 To: Gabrielle Anne Bertier; Manolis Dermitzakis Cc: Xavier Estivill Subject: WG: RNA-seq strandedness benchmark Dear RNA friends of gEUVADIS, Several weeks ago we have committed to perform the benchmarking study for strandedness protocols in the 5 samples with both Illumina GAIIx and SoliD V4 protocols. Matthias has put a lot of work into this and we would like to discuss the results with you and see how to proceed from here. I think the results are very interesting and are worth following up/finishing. Best, Philip & Matthias Prof. Dr. Philip Rosenstiel Institute of Clinical Molecular Biology University Kiel Schittenhelmstr.12 Building 5 24105 Kiel phone +49/4315971333 mobile +49/1773525080 -- Dr. Ralf Sudbrak EU Coordinator MPG Cluster Berlin-Brandenburg c/o Max Planck Institute for Molecular Genetics Ihnestr. 63 - 73 D-14195 Berlin Germany Fon: +49 (30) 8413 1612 Fax: +49 (30) 8413 1380 sudbrak@molgen.mpg.de<mailto:sudbrak@molgen.mpg.de>