Dear Tuuli

Our sequence facility only sequences 2x100 and not 2x75. Is it allowed to sequence 100bp and throw away the last 25 nucleotides?
Best

Peter

 

 


From: geuvadis_rnaseq-bounces@lists.crg.es [mailto:geuvadis_rnaseq-bounces@lists.crg.es] On Behalf Of Tuuli Lappalainen
Sent: Thursday, November 03, 2011 7:26 PM
To: geuvadis_rnaseq@lists.crg.es
Subject: [Geuvadis_rnaseq] Geuvadis RNAseq Minutes

 

Dear all,

Enclosed are the Minutes of this afternoon's TC. Action items copypasted below.

best regards,
Tuuli


 

Action items

-    Tuuli will take care of the RNA sample shipments (7/14 November) and inform the contact persons from each lab when the samples are shipped

-    Esther from Barcelona will email Tuuli further specifications of the miRNAseq protocol, including the minimum coverage per sample and how exactly that is defined

-    Tuuli will send the final version of the sequencing guidelines to all the labs by November 10

-    Gabrielle will set up a mailing list for the analysis group

-    After the labs have received the samples, there is one major action item for all partners: sequencing!

 
 
-- 
Tuuli Lappalainen, PhD
Department of Genetic Medicine and Development
University of Geneva Medical School
CMU / Rue Michel-Servet 1
1211 Geneva 4
Switzerland
Tel. +41-(0)22-3795550
tuuli.lappalainen@unige.ch