[Geuvadis_rna_analysis] Splice junction and intron quantifications available

Hello all, The final version of exon, gene and transcript quantifications are now on the ftp site in : /upload/geuvadis/wp4_rnaseq/main_project/analysis_data/quantification/ . These are in Gencode v12 with the reads with >6 mismatches removed. See the readme files and wiki for documentation - there are both raw counts, counts normalized by the number of exonic reads, and RPKMs for transcripts. Note that the files include all 667 samples, and later this week I will send information of those samples provide files without the couple of samples that we'll drop from all analyses. Splice junction and intron quantifications will follow later this week. best regards, Tuuli -- Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen(a)unige.ch