Re: [Geuvadis_rna_analysis] Analysis group TC September 12th - no, 13th...

Hello, We'll have Geuvadis analysis group TC on Thursday 12th of September at 2pm CET. On the agenda: - Analysis updates (see below) - Data visualization and Ensembl collaboration - Pedro will present on differential expression analysis - AOB Call details - different from the usual! Germany +49 692 573 804 41 Netherlands +31 108 920 271 Spain +34 931 816 661 Sweden +46 840 309 949 Switzerland +41 58 262 07 22 United Kingdom +44 203 370 57 19 United States +1 646 381 08 89 /Access code: 611683 / For your information, I have my knee surgery scheduled for this Friday. I'll probably be offline only for a couple of days, but I'm not sure if I'll be able to work that much next week. Thus, if you need some feedback or data from me, let me know now so we can try to sort it out before the surgery. We need to start wrapping up the analysis soon to put the paper together. Thus I'd like to ask you to give brief summary on the stage of your analysis - what you've been doing, are what kind of things are still pending, and when you would be ready to present the result and hand results and text over to me. Below is a list of analyses/people from the paper outline - if your name is there but you won't be on the call, please send the info to the analysis group mailing list before the call. -QC - Jonas, Olof, Peter, Tuuli - Differential expression - Pedro - mRNA qualitative/quantitative variation - Jean, Mar - ASE - Tuuli - Splicing variation - Micha - Soft splicing - Matthias - miRNA-mRNA interactions - Marc, Henk? - RNA editing - Thomas W - Conjoined genes - Liliana - n-TARs - Daniela - Transcription of repeats - Peter/Irina - QTLs - Tuuli - Loss-of-function - Manny - Data visualization - Natalja best regards, Tuuli -- Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen(a)unige.ch _______________________________________________ Geuvadis_rna_analysis mailing list Geuvadis_rna_analysis(a)lists.crg.es http://davinci.crg.es/mailman/listinfo/geuvadis_rna_analysis