[Geuvadis_rna_analysis] geuvadis file uploads and naming

Dear all, Could I please ask everyone to submit the data that are ready? The few dropouts can be submitted later, and we still have a few weeks until the deadline, but it would be great to get the big data batches into the mapping pipelines as soon as they're done. For mRNA, we're lacking data from Kiel and Berlin, and for miRNA I am the only one who has submitted the data. A couple of file naming practicalities for special cases: - if you're running the same library on several lanes of the same run: please use just the first of the two lanes in the file name, but include both in the sample information sheet (e.g 3_4). - for miRNA, some labs (us and Kiel at least) had to rerun the same libraries twice to get more coverage. In such a case, please check that the quantifications are consistent for all the samples before merging the fastq files. In the file naming, use the date and lane of one of runs and include both in the sample information sheet column. best regards, Tuuli -- Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen(a)unige.ch