[Geuvadis_rna_analysis] mRNA sample information sheet

Hello all, Here is a spreadsheet with information of which mRNA samples to use in analysis. Some numbers: - Total number of samples 667 with 464 unique individuals - 6 samples fail QC (QC_OK column == 0, with some description under QC_Info) - Total number of unique individuals that pass QC is 462 (UseThisSample==1) For individuals that have both the low-coverage and high-coverage replicate passing QC, I've always chosen the primary high-coverage sample. For the 5 replicates I took the one with the highest number of well mapped reads. I doubt that there will be a need to change the QC pass/fail status due to any future QC discoveries. However, we can add some other QC-related warnings in the QC_Info column of samples that pass QC. best regards, Tuuli -- Tuuli Lappalainen, PhD Department of Genetic Medicine and Development University of Geneva Medical School CMU / Rue Michel-Servet 1 1211 Geneva 4 Switzerland Tel. +41-(0)22-3795550 tuuli.lappalainen(a)unige.ch