5 Apr
2012
5 Apr
'12
2:41 p.m.
Tuuli Lappalainen, PhD
Department of Genetic Medicine and Development
University of Geneva Medical School
CMU / Rue Michel-Servet 1
1211 Geneva 4
Switzerland
Tel. +41-(0)22-3795550
tuuli.lappalainen(a)unige.ch
-------- Original Message --------
Subject: Geuvadis analysis group meeting in Geneva
Date: Thu, 05 Apr 2012 11:28:49 +0200
From: Tuuli Lappalainen <Tuuli.Lappalainen(a)unige.ch>
To: Tuuli.Lappalainen(a)unige.ch, gabrielle.bertier(a)crg.es,
olof.karlberg(a)medsci.uu.se, jean.monlong(a)crg.eu, p.a.c.hoen(a)lumc.nl,
i.pulyakhina(a)lumc.nl, jonas.carlsson(a)medsci.uu.se, esther.lizano(a)crg.eu,
natalja(a)ebi.ac.uk, pedro.ferreira(a)crg.es, marc.friedlaender(a)crg.eu,
r.haesler(a)mucosa.de, m.barann(a)ikmb.uni-kiel.de,
timstrom(a)helmholtz-muenchen.de, thomas.wieland(a)helmholtz-muenchen.de,
thomas.schwarzmayr(a)helmholtz-muenchen.de, sultan(a)molgen.mpg.de,
micha(a)sammeth.net, rivas(a)broadinstitute.org
CC: Ancilla Stefani <Ancilla.Stefani(a)unige.ch>
Hello,
Thank you for registering for the Geuvadis analysis group meeting. We'll
be 20 people in total, and I'm sure it will be a very productive meeting!
Some accommodation practicalities: Hotel Bel Esperance had some rooms
available after all, so we decided to accommodate 4 people there - thus
far we put Esther, Marc F., Peter and Irina there, but if you prefer
Adriatica we can change this. If someone doesn't have accommodation
arranged yet: we have one extra room booked at Bel Esperance, and we can
give this to you if you let me and/or our admin assistant Ancilla
(ancilla.stefani(a)unige.ch) know by April 11.
The program draft is below, and we'll discuss it on the analysis group
TC today. Please let me know if you have schedule conflicts or other
suggestions. This is an informal meeting, so we can also change the
times on the fly if needed.
I will send a document with the final program and info on practicalities
this weekend.
best regards,
Tuuli
Monday, April 16
11 -12 am Geuvadis RNAseq project: Background, aims and data
12 am -12:30 pm Lunch
12:30 -- 2:30pm Presentation by the labs: Ideas, interests, analysis
plans and approaches. 10-25 min each + discussion
Geneva
CNAG
Oxford
EBI
2:30 -3 pm Coffee
3 -5 pm Presentation by the labs:
Kiel
Munich
CRG
Leiden
Uppsala
Berlin
5 - 5:30 pm Wrap-up
8 pm Dinner at Restaurant Demi-Lune
Tuesday, April 17
9 -11:30 am Building an analysis plan
11:30 -12:30 am Lunch
12:30 -- 2:30 pm Building an analysis plan
2:30 -- 3 pm Coffee
3 -- 3:30 pm Wrap-up
Questions for Tuesday:
-What are the essential analyses that must be done? What else will we
do? What are the high-priority analyses?
-How do we integrate the different data types?
-What kind of data types/formats are needed for the analyses? Sharing of
tools and data?
-Who will take the lead of each analysis module? Who else wants to be
involved/informed?
-What are the analyses to do for the Biology of Genomes poster?
-Timelines and deadlines
-Future meetings
-Communication: TCs, mailing lists, wiki, skype
--
Tuuli Lappalainen, PhD
Department of Genetic Medicine and Development
University of Geneva Medical School
CMU / Rue Michel-Servet 1
1211 Geneva 4
Switzerland
Tel. +41-(0)22-3795550
tuuli.lappalainen(a)unige.ch